BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027B11LP1|AL428679
(882 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1156 1748 0.0
>3x_Contig1156
Length = 4141
Score = 1748 bits (882), Expect = 0.0
Identities = 882/882 (100%)
Strand = Plus / Minus
Query: 1 gctttcaattatcaattcgactctgtgagagaattagctgagaaattcgcattaatcgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2394 gctttcaattatcaattcgactctgtgagagaattagctgagaaattcgcattaatcgct 2335
Query: 61 ggttacggtaaggccttactagaactattggacgattctccagtgactcctggagaagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2334 ggttacggtaaggccttactagaactattggacgattctccagtgactcctggagaagct 2275
Query: 121 agagccgcttacgatggttacgaagcttcaagacaaatcatcatggatgccgaatcagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2274 agagccgcttacgatggttacgaagcttcaagacaaatcatcatggatgccgaatcagct 2215
Query: 181 ttggaatcctggaccttggatgtcgctgctatcaagccaactttgtccttccaccaaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2214 ttggaatcctggaccttggatgtcgctgctatcaagccaactttgtccttccaccaaaca 2155
Query: 241 gtcgatgatgtttacgtcgatgaagatggcgaggaaggtgaagccttagctgctgaagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2154 gtcgatgatgtttacgtcgatgaagatggcgaggaaggtgaagccttagctgctgaagaa 2095
Query: 301 gagtgggctggtgaacatgaaggtggccaagaagaagaagctgttgagactactgaagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2094 gagtgggctggtgaacatgaaggtggccaagaagaagaagctgttgagactactgaagtt 2035
Query: 361 aaataagctctcgcgatcacatgcgttagtttattttaccaatgccgctacactcacttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2034 aaataagctctcgcgatcacatgcgttagtttattttaccaatgccgctacactcacttc 1975
Query: 421 tttaaaaatgtatgtggctagcgtatattggaatgatttattgtagaatcaaatactcgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1974 tttaaaaatgtatgtggctagcgtatattggaatgatttattgtagaatcaaatactcgt 1915
Query: 481 tcctgccgtgtacgtgccctctttaacttttaaaaatgaatttttccagagagctcgcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1914 tcctgccgtgtacgtgccctctttaacttttaaaaatgaatttttccagagagctcgcaa 1855
Query: 541 tgttactgtgtgacaggtaaaacggtagtatgtgaagtccgttataccattgctactctc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1854 tgttactgtgtgacaggtaaaacggtagtatgtgaagtccgttataccattgctactctc 1795
Query: 601 atattctatgtaataaaacatttctatatctcttttaagtaacactaacttctaatatcg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1794 atattctatgtaataaaacatttctatatctcttttaagtaacactaacttctaatatcg 1735
Query: 661 tgctgagttaataacagccattggaattcggtcgtaatatcgatcaatctgttttgaatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1734 tgctgagttaataacagccattggaattcggtcgtaatatcgatcaatctgttttgaatt 1675
Query: 721 ttcctgctggcttctctaggtatgaataaaaacggccaataaatcacaggaaataacact 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1674 ttcctgctggcttctctaggtatgaataaaaacggccaataaatcacaggaaataacact 1615
Query: 781 cgaaaagtctttggatttagtggaaagttcgagctagcaaggataagatacggaacaacg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1614 cgaaaagtctttggatttagtggaaagttcgagctagcaaggataagatacggaacaacg 1555
Query: 841 tgataattgattcaagtatcctttttagaaacataagtatat 882
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1554 tgataattgattcaagtatcctttttagaaacataagtatat 1513
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6798
Number of Sequences: 1807
Number of extensions: 6798
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 882
length of database: 10,358,551
effective HSP length: 16
effective length of query: 866
effective length of database: 10,329,639
effective search space: 8945467374
effective search space used: 8945467374
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)